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Code Issues Packages Projects Releases Wiki Activity
414 Commits 11 Branches 54 Tags
7e06dec2d0a19ee6e0008e92ea87f54fc225d2fd
Commit Graph
62 Commits
Author SHA1 Message Date
chhylp123 9dc530cbfb low hamming for sampels with low het rate 2021-06-09 20:10:50 -04:00
chhylp123 aa164949f2 backup phasing 2021-05-31 04:19:05 -04:00
chhylp123 e774a83be2 debug mbg 2021-05-30 09:02:25 -04:00
chhylp123 a39f01f4d8 haplotype popping 2021-05-24 19:43:50 -04:00
chhylp123 626787ab8a complex cleaning 2021-05-20 17:03:18 -04:00
chhylp123 5c1680e998 fix missed ug when bubble popping 2021-05-19 10:16:23 -04:00
chhylp123 b12e008416 new somatic variant popping 2021-05-19 09:52:40 -04:00
chhylp123 be8e1e3117 sc debug 2021-05-17 00:12:41 -04:00
chhylp123 4105dd360e correction 2021-05-11 13:01:06 -04:00
chhylp123 7918396d21 collect contig alignment + renew_utg bug fixed 2021-05-09 17:47:50 -04:00
chhylp123 9ea4f6917f resolve centromere 2021-05-06 07:59:51 -04:00
chhylp123 24e5453781 bug fix 2021-05-02 14:16:36 -04:00
chhylp123 9c205c8271 resove tangle by hic 2021-04-30 22:44:48 -04:00
chhylp123 71e91f3fc2 assgin disconnected parts 2021-04-28 20:27:43 -04:00
chhylp123 2fc2268268 phasing improvement 2021-04-27 21:35:49 -04:00
chhylp123 1456686665 fast weight 2021-04-25 06:05:23 -04:00
chhylp123 c972c64b39 add "n-weight" 2021-04-24 00:03:36 -04:00
chhylp123 7b07e355b7 bug fix for bubble scanning 2021-04-23 20:40:43 -04:00
chhylp123 a5b29b00bd topo phasing 2021-04-22 22:38:52 -04:00
chhylp123 278efaa876 block phasing 2021-04-21 10:58:58 -04:00
chhylp123 475ebb8075 keep long range information 2021-04-20 01:29:15 -04:00
chhylp123 39c19618e8 backup hic 2021-04-18 21:57:16 -04:00
chhylp123 49ead1ef35 bub disable 2021-04-17 04:23:32 -04:00
chhylp123 4bc43cec92 bug fixed 2021-04-17 00:31:19 -04:00
chhylp123 efacf8e796 bug fixing 2021-04-16 22:26:28 -04:00
chhylp123 f8ee584291 code clean 2021-04-16 20:28:48 -04:00
chhylp123 1e86e3dc02 best flipping 2021-04-14 18:50:20 -04:00
chhylp123 67c7218264 fix distance bug 2021-04-13 01:18:49 -04:00
chhylp123 36afbce9bc update unitig distance 2021-04-12 04:54:06 -04:00
chhylp123 7235f6426f back_up_hic 2021-04-11 10:59:26 -04:00
chhylp123 8f733750c4 variant calling 2021-04-10 21:58:53 -04:00
chhylp123 1a6f386823 backup trans_chain 2021-04-04 20:27:19 -04:00
chhylp123 8e75eb5a05 keep l1 trans 2021-04-04 14:00:28 -04:00
chhylp123 46e899bbae backup r321 2021-04-01 21:02:57 -04:00
chhylp123 0605aa1961 r317 2021-03-27 02:46:48 -04:00
chhylp123 24a19d7976 more accurate purging 2021-03-26 18:07:30 -04:00
chhylp123 d89a630ff3 update contig flipping 2021-03-25 03:03:19 -04:00
chhylp123 ede6ccef00 fix misassemblies 2021-03-20 18:36:02 -04:00
chhylp123 98a04c168a update r313 2021-03-18 05:26:33 -04:00
chhylp123 3b4953521f trio bug fixed 2021-03-16 02:36:19 -04:00
chhylp123 8e4b98f0a6 bubble label 2021-03-14 03:25:19 -04:00
chhylp123 4c2ce6fc6b update trans chain 2021-03-10 22:46:50 -05:00
chhylp123 8aa87fdce8 purge_dups for high het 2021-03-08 20:52:11 -05:00
chhylp123 e8b92f7a40 backup for hic 2021-02-18 00:58:25 -05:00
chhylp123 02fa015e28 fix memory leak 2021-02-13 23:58:39 -05:00
chhylp123 18086e2c2e update 0.14-r310 2021-02-13 23:21:45 -05:00
chhylp123 5bb22f701c debug hic_hits 2021-02-09 18:40:49 -05:00
chhylp123 8467d58ef1 for v0.14 2021-02-09 13:00:23 -05:00
chhylp123 fda13cb0e4 update -z 2021-02-02 12:45:50 -05:00
chhylp123 02b9a3e109 hic multiple rounds 2021-01-31 18:49:08 -05:00